BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020D05LP1|AL427612
(1053 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1237 783 0.0
>3x_Contig1237
Length = 6632
Score = 783 bits (393), Expect = 0.0
Identities = 812/951 (85%), Gaps = 1/951 (0%)
Strand = Plus / Plus
Query: 30 agttaagagttttaaaaattttaaagatgtttttagatgatatttgagatataaaatata 89
||||||||||||| || |||| ||| ||||||| |||| | ||||||||||||| ||||
Sbjct: 4791 agttaagagttttcaaccttttcaagctgtttttcgatgctctttgagatataaactata 4850
Query: 90 gtgaaggaaagagagaaggttaataggtgattgagaaaagttgaaagttgttattaaaaa 149
|||||||||||||||| ||| ||| |||| || |||| |||||||||||||| ||||||
Sbjct: 4851 gtgaaggaaagagagacggtcaatcggtgcttcagaacagttgaaagttgttcttaaaac 4910
Query: 150 atggataaagttataaatttaattatattaagaaaagaaatataatgaagaaaaaatgta 209
|||||| |||||| | |||| |||| || || |||| ||| || ||||||| ||||
Sbjct: 4911 ctggatacagttatcactttacttatcttcagcaaagccctatcctgcagaaaaactgta 4970
Query: 210 ttatgtttwtttwtgatttatwaatttaaatttaaataaagagataaaattaaaaatttt 269
|||||||| ||| |||||||| ||||| |||||||| ||||||| |||||||||||
Sbjct: 4971 ttatgtttctttctgatttatcaatttccctttaaatacagagatacccttaaaaatttt 5030
Query: 270 aaaattataaattaataagaattaatgtaagattttggagtaaaaaagggaagatttgga 329
|| | |||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 5031 ccccttctcaattaataagccttaatgtaagattttcgagtaaaaaagggaagatttgga 5090
Query: 330 tgtaggtaaaatgaaatgaaaaggaattgaaaatggttagatttgaatataatagaaatt 389
||||||| ||||||| |||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 5091 tgtaggtcaaatgaactgaaaaggaattgaaaatggttcgatttgaatataatcgaaatt 5150
Query: 390 aaataattaaaaatgtaaaaaagagaatdaaaaaatagaaaggattaaagttataatgga 449
||||||||| |||||||||| |||||| | | ||||| | ||||||||||| ||||||
Sbjct: 5151 caataattaacaatgtaaaaacgagaatcacacaatagcacggattaaagttctaatggc 5210
Query: 450 taattatgtwagtatatggattattaagtgaagtaaaataatttatgaragattatwaaa 509
|| |||||| |||| ||||||||| |||| |||| |||| ||| ||| ||||||| ||
Sbjct: 5211 tacttatgtccgtatctggattattcagtgcagtacaatactttctgaaagattatcaac 5270
Query: 510 tagtttatattgaaattttgagatattttaaaaagtgagattagaattgatataggtatt 569
| |||| | ||||||||||||| | |||| || |||| ||||||||||| | ||||||||
Sbjct: 5271 tcgtttctcttgaaattttgagctcttttcaacagtgcgattagaattgctctaggtatt 5330
Query: 570 aaggaaaagagaaaggagttaaagagaagaaggaaaaataaagtattagaaggaggag-a 628
||||||||||||| ||||||||||||||||||||||||||| ||||||| ||| |||| |
Sbjct: 5331 aaggaaaagagaacggagttaaagagaagaaggaaaaataacgtattagcaggcggagca 5390
Query: 629 aaaaaaaagaagaataagtaatataaaatttattgatatatatttattttaaggaaggta 688
|| || ||| ||||||||||||| || ||| ||| | |||||||||||| ||||||||
Sbjct: 5391 aacaaccagacgaataagtaatatcaactttcttgctctatatttattttccggaaggta 5450
Query: 689 tattgttgaagtatattaaaagaagaaaaggatgaaaagaaagattaaggaaaatgaaaa 748
| |||||| ||| |||| | || ||||||| ||||||||| |||||||||||||| |||
Sbjct: 5451 tcttgttgcagtctattccacgacgaaaaggctgaaaagaacgattaaggaaaatgcaaa 5510
Query: 749 agaaagggataggtttaagttaatgatgaaatagagaaatattagttatagtaaatgaaa 808
|||| ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||| |
Sbjct: 5511 agaacgggataggtttcagttactgatgaactagagaaatattagttatagtaaatgaca 5570
Query: 809 ggtagaagatagaaagataggaaaagtatagagatttgaaatgatttagaaggaatgttt 868
||| |||||||||| | ||||||| |||||| | |||| |||||||| ||||| |||||
Sbjct: 5571 ggtcgaagatagaacgctaggaaacgtatagcgctttgcaatgatttcgaaggcctgttt 5630
Query: 869 aaagtgttgaatttatatgaatggttattaaataaaagagggaaggtatatatgtgagag 928
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5631 aaagtgttgaatttctatgaatggttattacataaaagagggaaggtatatatgtgagag 5690
Query: 929 tattaaggaaaaggaaaagttaggagaagaatataatgaatagataagata 979
|||||||| | ||||| ||| |||||||||||| ||||| ||| |||||
Sbjct: 5691 tattaaggcacaggaaccgttcggagaagaatatcctgaatcgatcagata 5741
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 18,054
Number of Sequences: 1807
Number of extensions: 18054
Number of successful extensions: 248
Number of sequences better than 1.0e-20: 1
length of query: 1053
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1037
effective length of database: 10,329,639
effective search space: 10711835643
effective search space used: 10711835643
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)